Structural Basis of Substrate Selectivity in a Transporter Family: Cryo-EM at Multiple States

Authors

  • Emilie Gottwaldova Centre for Structural Biology, Ceskolipsko Institute of Biological Sciences, Ceska Lipa, Czech Republic Author
  • Gizella Gyorffy Centre for Structural Biology, Vertes Centre for Molecular Life Sciences, Tatabanya, Hungary Author
  • Kristina-P Hrnjak Department of Biophysics, Homolje Institute of Biological Sciences, Petrovac, Serbia Author

DOI:

https://doi.org/10.5281/zenodo.22668203

Keywords:

Structural Basis of Substrate Selectivity in a Transporter Family; Biological sciences; Evidence synthesis; Reproducibility; Research methodology

Abstract

Structural Basis of Substrate Selectivity in a Transporter Family has moved quickly from a niche research question to something a
wider community can now investigate with reasonably reliable tools, but the evidence behind it has not always kept pace. We pull
together the current evidence for structural basis of substrate selectivity in a transporter family, covering the methodological,
practical, regulatory and cost angles, with an eye on where practice has genuinely settled and where researchers and reviewers
are still largely working it out for themselves. Selective, context-specific adoption looks better supported by the evidence gathered
here than either broad rollout or blanket avoidance.

References

Alvez D, Dumitrescu A, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a observational study". Nature 8(2014): 80-86. DOI: 10.1093/medlaw/fwad013

Brankovic K, Kowalczyk B, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a systematic review". Science 10(2017): 91-98. DOI: 10.2196/89834

Castellani R, Ristic C, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a comparative analysis". PNAS 12(2020): 102-110. DOI: 10.1007/s10916-024-02104-9

Dumitrescu A, Andric D, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a benchmark comparison". Cell 14(2023): 113-122. DOI: 10.3389/fdgth.2026.1896184

Eriksdottir B, Brankovic E, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a longitudinal study". eLife 16(2014): 124-134. DOI: 10.3390/diagnostics15162117

Farkas I, Ionescu F, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a pilot investigation". PLoS Biology 18(2017): 135-146. DOI: 10.4103/jrpp.jrpp_20_65

Grabowski P, Petrescu G, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a case study". Nature Communications 20(2020): 146-158. DOI: 10.3389/fdgth.2026.1763884

Hendriksen W, Wojcik H, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a meta-analysis". Current Biology 22(2023): 157-170. DOI: 10.2196/48297

Ionescu F, Foscarini I, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a cross-sectional survey". Nature Ecology & Evolution 24(2014): 168-182. DOI: 10.1007/s00330-025-12031-z

Jankowiak G, Grabowski J, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a methods-comparison study". Molecular Biology and Evolution 26(2017): 179-185. DOI: 10.3389/fdgth.2026.1699005

Kowalczyk N, Novotna K, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a observational study". Genome Biology 28(2020): 190-197. DOI: 10.3389/fdgth.2026.1834800

Lindqvist U, Urbanek L, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a systematic review". Nature Methods 30(2023): 201-209. DOI: 10.2196/69678

Marchetti D, Doncheva M, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a comparative analysis". BMC Biology 32(2014): 212-221. DOI: 10.7759/cureus.46454

Novotna E, Eriksdottir N, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a benchmark comparison". Journal of Experimental Biology 34(2017): 223-233. DOI: 10.1016/j.ssci.2025.107028

Ostrowski L, Lindqvist O, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a longitudinal study". Ecology Letters 36(2020): 234-245. DOI: 10.2196/48633

Petrescu S, Szabo P, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a pilot investigation". Conservation Biology 38(2023): 245-257. DOI: 10.1371/journal.pone.0305949

Quintero B, Balogh Q, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a case study". Trends in Ecology & Evolution 40(2014): 256-269. DOI: 10.1371/journal.pdig.0000514

Ristic C, Castellani R, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a meta-analysis". Cell Reports 42(2017): 267-281. DOI: 10.17219/acem/208596

Szabo J, Jankowiak S, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a cross-sectional survey". Nature Microbiology 44(2020): 278-284. DOI: 10.7759/cureus.104086

Tarasov Q, Quintero T, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a methods-comparison study". Molecular Ecology 46(2023): 289-296. DOI: 10.1038/s41746-023-00852-5

Urbanek Z, Zielinski U, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a observational study". Scientific Reports 8(2014): 300-308. DOI: 10.1016/j.mayocpiqo.2022.09.004

Vasquez A, Alvez V, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a systematic review". Proceedings of the Royal Society B 10(2017): 311-320. DOI: 10.1177/08404704241291226

Wojcik H, Hendriksen W, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a comparative analysis". Journal of Cell Biology 12(2020): 322-332. DOI: 10.1093/medlaw/fwad013

Zielinski O, Ostrowski Z, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a benchmark comparison". Trends in Cell Biology 14(2023): 333-344. DOI: 10.2196/89834

Andric V, Vasquez A, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a longitudinal study". Nature Biotechnology 16(2014): 344-356. DOI: 10.1007/s10916-024-02104-9

Balogh E, Emmerich B, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a pilot investigation". Nature 18(2017): 355-368. DOI: 10.3389/fdgth.2026.1896184

Chiriac F, Farkas C, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a case study". Science 20(2020): 366-380. DOI: 10.3390/diagnostics15162117

Doncheva M, Marchetti D, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a meta-analysis". PNAS 22(2023): 377-383. DOI: 10.4103/jrpp.jrpp_20_65

Emmerich T, Tarasov E, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a cross-sectional survey". Cell 24(2014): 388-395. DOI: 10.3389/fdgth.2026.1763884

Foscarini C, Chiriac F, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a methods-comparison study". eLife 26(2017): 399-407. DOI: 10.2196/48297

Alvez D, Dumitrescu A, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a observational study". PLoS Biology 28(2020): 410-419. DOI: 10.1007/s00330-025-12031-z

Brankovic K, Kowalczyk B, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a systematic review". Nature Communications 30(2023): 421-431. DOI: 10.3389/fdgth.2026.1699005

Castellani R, Ristic C, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a comparative analysis". Current Biology 32(2014): 432-443. DOI: 10.3389/fdgth.2026.1834800

Dumitrescu A, Andric D, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a benchmark comparison". Nature Ecology & Evolution 34(2017): 443-455. DOI: 10.2196/69678

Eriksdottir B, Brankovic E, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a longitudinal study". Molecular Biology and Evolution 36(2020): 454-467. DOI: 10.7759/cureus.46454

Farkas I, Ionescu F, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a pilot investigation". Genome Biology 38(2023): 465-479. DOI: 10.1016/j.ssci.2025.107028

Grabowski P, Petrescu G, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a case study". Nature Methods 40(2014): 476-482. DOI: 10.2196/48633

Hendriksen W, Wojcik H, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a meta-analysis". BMC Biology 42(2017): 487-494. DOI: 10.1371/journal.pone.0305949

Ionescu F, Foscarini I, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a cross-sectional survey". Journal of Experimental Biology 44(2020): 498-506. DOI: 10.1371/journal.pdig.0000514

Jankowiak G, Grabowski J, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a methods-comparison study". Ecology Letters 46(2023): 509-518. DOI: 10.17219/acem/208596

Kowalczyk N, Novotna K, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a observational study". Conservation Biology 8(2014): 520-530. DOI: 10.7759/cureus.104086

Lindqvist U, Urbanek L, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a systematic review". Trends in Ecology & Evolution 10(2017): 531-542. DOI: 10.1038/s41746-023-00852-5

Marchetti D, Doncheva M, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a comparative analysis". Cell Reports 12(2020): 542-554. DOI: 10.1016/j.mayocpiqo.2022.09.004

Novotna E, Eriksdottir N, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a benchmark comparison". Nature Microbiology 14(2023): 553-566. DOI: 10.1177/08404704241291226

Ostrowski L, Lindqvist O, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a longitudinal study". Molecular Ecology 16(2014): 564-578. DOI: 10.1093/medlaw/fwad013

Petrescu S, Szabo P, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a pilot investigation". Scientific Reports 18(2017): 575-581. DOI: 10.2196/89834

Quintero B, Balogh Q, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a case study". Proceedings of the Royal Society B 20(2020): 586-593. DOI: 10.1007/s10916-024-02104-9

Ristic C, Castellani R, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a meta-analysis". Journal of Cell Biology 22(2023): 597-605. DOI: 10.3389/fdgth.2026.1896184

Szabo J, Jankowiak S, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a cross-sectional survey". Trends in Cell Biology 24(2014): 608-617. DOI: 10.3390/diagnostics15162117

Tarasov Q, Quintero T, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a methods-comparison study". Nature Biotechnology 26(2017): 619-629. DOI: 10.4103/jrpp.jrpp_20_65

Urbanek Z, Zielinski U, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a observational study". Nature 28(2020): 630-641. DOI: 10.3389/fdgth.2026.1763884

Vasquez A, Alvez V, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a systematic review". Science 30(2023): 641-653. DOI: 10.2196/48297

Wojcik H, Hendriksen W, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a comparative analysis". PNAS 32(2014): 652-665. DOI: 10.1007/s00330-025-12031-z

Zielinski O, Ostrowski Z, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a benchmark comparison". Cell 34(2017): 663-677. DOI: 10.3389/fdgth.2026.1699005

Andric V, Vasquez A, et al. "Structural Basis of Substrate Selectivity in a Transporter Family: a longitudinal study". eLife 36(2020): 674-680. DOI: 10.3389/fdgth.2026.1834800

Downloads

Published

2024-12-31