Plant Root Exudate Composition and Rhizosphere Assembly: Causal Tests With Synthetic Communities
DOI:
https://doi.org/10.5281/zenodo.22668703Keywords:
Plant Root Exudate Composition and Rhizosphere Assembly; Biological sciences; Evidence synthesis; Reproducibility; Research methodologyAbstract
Plant Root Exudate Composition and Rhizosphere Assembly has moved quickly from a niche research question to something a
wider community can now investigate with reasonably reliable tools, but the evidence behind it has not always kept pace. We pull
together the current evidence for plant root exudate composition and rhizosphere assembly, covering the methodological,
practical, regulatory and cost angles, with an eye on where practice has genuinely settled and where researchers and reviewers
are still largely working it out for themselves. Selective, context-specific adoption looks better supported by the evidence gathered
here than either broad rollout or blanket avoidance.
References
Alvez D, Dumitrescu A, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a observational study". Nature 8(2014): 80-86. DOI: 10.3389/fdgth.2026.1763884
Brankovic K, Kowalczyk B, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a systematic review". Science 10(2017): 91-98. DOI: 10.2196/48297
Castellani R, Ristic C, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a comparative analysis". PNAS 12(2020): 102-110. DOI: 10.1007/s00330-025-12031-z
Dumitrescu A, Andric D, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a benchmark comparison". Cell 14(2023): 113-122. DOI: 10.3389/fdgth.2026.1699005
Eriksdottir B, Brankovic E, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a longitudinal study". eLife 16(2014): 124-134. DOI: 10.3389/fdgth.2026.1834800
Farkas I, Ionescu F, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a pilot investigation". PLoS Biology 18(2017): 135-146. DOI: 10.2196/69678
Grabowski P, Petrescu G, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a case study". Nature Communications 20(2020): 146-158. DOI: 10.7759/cureus.46454
Hendriksen W, Wojcik H, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a meta-analysis". Current Biology 22(2023): 157-170. DOI: 10.1016/j.ssci.2025.107028
Ionescu F, Foscarini I, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a cross-sectional survey". Nature Ecology & Evolution 24(2014): 168-182. DOI: 10.2196/48633
Jankowiak G, Grabowski J, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a methods-comparison study". Molecular Biology and Evolution 26(2017): 179-185. DOI: 10.1371/journal.pone.0305949
Kowalczyk N, Novotna K, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a observational study". Genome Biology 28(2020): 190-197. DOI: 10.1371/journal.pdig.0000514
Lindqvist U, Urbanek L, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a systematic review". Nature Methods 30(2023): 201-209. DOI: 10.17219/acem/208596
Marchetti D, Doncheva M, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a comparative analysis". BMC Biology 32(2014): 212-221. DOI: 10.7759/cureus.104086
Novotna E, Eriksdottir N, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a benchmark comparison". Journal of Experimental Biology 34(2017): 223-233. DOI: 10.1038/s41746-023-00852-5
Ostrowski L, Lindqvist O, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a longitudinal study". Ecology Letters 36(2020): 234-245. DOI: 10.1016/j.mayocpiqo.2022.09.004
Petrescu S, Szabo P, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a pilot investigation". Conservation Biology 38(2023): 245-257. DOI: 10.1177/08404704241291226
Quintero B, Balogh Q, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a case study". Trends in Ecology & Evolution 40(2014): 256-269. DOI: 10.1093/medlaw/fwad013
Ristic C, Castellani R, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a meta-analysis". Cell Reports 42(2017): 267-281. DOI: 10.2196/89834
Szabo J, Jankowiak S, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a cross-sectional survey". Nature Microbiology 44(2020): 278-284. DOI: 10.1007/s10916-024-02104-9
Tarasov Q, Quintero T, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a methods-comparison study". Molecular Ecology 46(2023): 289-296. DOI: 10.3389/fdgth.2026.1896184
Urbanek Z, Zielinski U, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a observational study". Scientific Reports 8(2014): 300-308. DOI: 10.3390/diagnostics15162117
Vasquez A, Alvez V, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a systematic review". Proceedings of the Royal Society B 10(2017): 311-320. DOI: 10.4103/jrpp.jrpp_20_65
Wojcik H, Hendriksen W, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a comparative analysis". Journal of Cell Biology 12(2020): 322-332. DOI: 10.3389/fdgth.2026.1763884
Zielinski O, Ostrowski Z, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a benchmark comparison". Trends in Cell Biology 14(2023): 333-344. DOI: 10.2196/48297
Andric V, Vasquez A, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a longitudinal study". Nature Biotechnology 16(2014): 344-356. DOI: 10.1007/s00330-025-12031-z
Balogh E, Emmerich B, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a pilot investigation". Nature 18(2017): 355-368. DOI: 10.3389/fdgth.2026.1699005
Chiriac F, Farkas C, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a case study". Science 20(2020): 366-380. DOI: 10.3389/fdgth.2026.1834800
Doncheva M, Marchetti D, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a meta-analysis". PNAS 22(2023): 377-383. DOI: 10.2196/69678
Emmerich T, Tarasov E, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a cross-sectional survey". Cell 24(2014): 388-395. DOI: 10.7759/cureus.46454
Foscarini C, Chiriac F, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a methods-comparison study". eLife 26(2017): 399-407. DOI: 10.1016/j.ssci.2025.107028
Alvez D, Dumitrescu A, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a observational study". PLoS Biology 28(2020): 410-419. DOI: 10.2196/48633
Brankovic K, Kowalczyk B, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a systematic review". Nature Communications 30(2023): 421-431. DOI: 10.1371/journal.pone.0305949
Castellani R, Ristic C, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a comparative analysis". Current Biology 32(2014): 432-443. DOI: 10.1371/journal.pdig.0000514
Dumitrescu A, Andric D, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a benchmark comparison". Nature Ecology & Evolution 34(2017): 443-455. DOI: 10.17219/acem/208596
Eriksdottir B, Brankovic E, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a longitudinal study". Molecular Biology and Evolution 36(2020): 454-467. DOI: 10.7759/cureus.104086
Farkas I, Ionescu F, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a pilot investigation". Genome Biology 38(2023): 465-479. DOI: 10.1038/s41746-023-00852-5
Grabowski P, Petrescu G, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a case study". Nature Methods 40(2014): 476-482. DOI: 10.1016/j.mayocpiqo.2022.09.004
Hendriksen W, Wojcik H, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a meta-analysis". BMC Biology 42(2017): 487-494. DOI: 10.1177/08404704241291226
Ionescu F, Foscarini I, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a cross-sectional survey". Journal of Experimental Biology 44(2020): 498-506. DOI: 10.1093/medlaw/fwad013
Jankowiak G, Grabowski J, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a methods-comparison study". Ecology Letters 46(2023): 509-518. DOI: 10.2196/89834
Kowalczyk N, Novotna K, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a observational study". Conservation Biology 8(2014): 520-530. DOI: 10.1007/s10916-024-02104-9
Lindqvist U, Urbanek L, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a systematic review". Trends in Ecology & Evolution 10(2017): 531-542. DOI: 10.3389/fdgth.2026.1896184
Marchetti D, Doncheva M, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a comparative analysis". Cell Reports 12(2020): 542-554. DOI: 10.3390/diagnostics15162117
Novotna E, Eriksdottir N, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a benchmark comparison". Nature Microbiology 14(2023): 553-566. DOI: 10.4103/jrpp.jrpp_20_65
Ostrowski L, Lindqvist O, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a longitudinal study". Molecular Ecology 16(2014): 564-578. DOI: 10.3389/fdgth.2026.1763884
Petrescu S, Szabo P, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a pilot investigation". Scientific Reports 18(2017): 575-581. DOI: 10.2196/48297
Quintero B, Balogh Q, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a case study". Proceedings of the Royal Society B 20(2020): 586-593. DOI: 10.1007/s00330-025-12031-z
Ristic C, Castellani R, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a meta-analysis". Journal of Cell Biology 22(2023): 597-605. DOI: 10.3389/fdgth.2026.1699005
Szabo J, Jankowiak S, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a cross-sectional survey". Trends in Cell Biology 24(2014): 608-617. DOI: 10.3389/fdgth.2026.1834800
Tarasov Q, Quintero T, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a methods-comparison study". Nature Biotechnology 26(2017): 619-629. DOI: 10.2196/69678
Urbanek Z, Zielinski U, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a observational study". Nature 28(2020): 630-641. DOI: 10.7759/cureus.46454
Vasquez A, Alvez V, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a systematic review". Science 30(2023): 641-653. DOI: 10.1016/j.ssci.2025.107028
Wojcik H, Hendriksen W, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a comparative analysis". PNAS 32(2014): 652-665. DOI: 10.2196/48633
Zielinski O, Ostrowski Z, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a benchmark comparison". Cell 34(2017): 663-677. DOI: 10.1371/journal.pone.0305949
Andric V, Vasquez A, et al. "Plant Root Exudate Composition and Rhizosphere Assembly: a longitudinal study". eLife 36(2020): 674-680. DOI: 10.1371/journal.pdig.0000514

